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Publications for: Urbauer, Jeffrey

Gilmore, J. M.; Bieber Urbauer, R. J.; Minakhin, L.; Akoyev, V.; Zolkiewski, M.; Severinov, K.; Urbauer, J. L. Determinants of affinity and activity of the anti-sigma factor AsiA. Biochemistry 2010, 49, 6143-54. Abstract
Lee, H.; Rivner, J.; Urbauer, J. L.; Gartil, N.; Wicker, L. De-esterification pattern of Valencia orange pectinmethylesterases and characterization of modified pectins. J Sci Food Agr 2008, 88, 2102-2110. Abstract
Nemec, K. N.; Pande, A. H.; Qin, S.; Urbauer, R. J. B.; Tan, S. H.; Moe, D.; Tatulian, S. A. Structural and functional effects of tryptophans inserted into the membrane-binding and substrate-binding sites of human group IIA phospholipase A(2). Biochemistry-Us 2006, 45, 12448-12460. Abstract
Xiong, Y.; Chen, B.; Smallwood, H. S.; Urbauer, R. J.; Markille, L. M.; Galeva, N.; Williams, T. D.; Squier, T. C. High-affinity and cooperative binding of oxidized calmodulin by methionine sulfoxide reductase. Biochemistry 2006, 45, 14642-54. Abstract
Yang, W.; Wilkins, A. L.; Ye, Y.; Liu, Z. R.; Li, S. Y.; Urbauer, J. L.; Hellinga, H. W.; Kearney, A.; van der Merwe, P. A.; Yang, J. J. Design of a calcium-binding protein with desired structure in a cell adhesion molecule. J Am Chem Soc 2005, 127, 2085-93. Abstract
Urbauer, R. J. B.; Gilmore, J. M.; Rosasco, S. E.; Hattle, J. M.; Cowley, A. B.; Urbauer, J. L. Cloning, high yield overexpression, purification, and characterization of AlgH, a regulator of alginate biosynthesis in Pseudomonas aeruginosa. Protein Expres Purif 2005, 43, 57-64. Abstract
Slaughter, B. D.; Unruh, J. R.; Price, E. S.; Huynh, J. L.; Urbauer, R. J. B.; Johnson, C. K. Sampling unfolding intermediates in calmodulin by single-molecule spectroscopy. J Am Chem Soc 2005, 127, 12107-12114. Abstract
Slaughter, B. D.; Unruh, J. R.; Allen, M. W.; Urbauer, R. J. B.; Johnson, C. K. Conformational substates of calmodulin revealed by single-pair fluorescence resonance energy transfer: Influence of solution conditions and oxidative modification. Biochemistry-Us 2005, 44, 3694-3707. Abstract
Osborn, K. D.; Zaidi, A.; Urbauer, R. J. B.; Michaelis, M. L.; Johnson, C. K. Single-molecule characterization of the dynamics of calmodulin bound to oxidatively modified plasma-membrane Ca2+-ATPase. Biochemistry-Us 2005, 44, 11074-11081. Abstract
Cowley, A. B.; Urbauer, R. J.; Urbauer, J. L. 1H, 13C and 15N NMR assignments for AlgH, a putative transcriptional regulator from Pseudomonas aeruginosa. J Biomol NMR 2005, 33, 74.
Bieber Urbauer, R. J.; Gilmore, J. M.; Rosasco, S. E.; Hattle, J. M.; Cowley, A. B.; Urbauer, J. L. Cloning, high yield overexpression, purification, and characterization of AlgH, a regulator of alginate biosynthesis in Pseudomonas aeruginosa. Protein Expr Purif 2005, 43, 57-64. Abstract
Anbanandam, A.; Bieber Urbauer, R. J.; Bartlett, R. K.; Smallwood, H. S.; Squier, T. C.; Urbauer, J. L. Mediating molecular recognition by methionine oxidation: conformational switching by oxidation of methionine in the carboxyl-terminal domain of calmodulin. Biochemistry 2005, 44, 9486-96. Abstract
Zheng, K.; Makagiansar, I. T.; Wang, M.; Urbauer, J. L.; Kuczera, K.; Siahaan, T. J. Expression, purification, and structural study of the EC4 domain of E-cadherin. Protein Expr Purif 2004, 33, 72-9. Abstract
Slaughter, B. D.; Allen, M. W.; Unruh, J. R.; Urbauer, R. J. B.; Johnson, C. K. Single-molecule resonance energy transfer and fluorescence correlation spectroscopy of calmodulin in solution. J Phys Chem B 2004, 108, 10388-10397. Abstract
Osborn, K. D.; Zaidi, A.; Mandal, A.; Urbauer, R. J.; Johnson, C. K. Single-molecule dynamics of the calcium-dependent activation of plasma-membrane Ca2+-ATPase by calmodulin. Biophysical Journal 2004, 87, 1892-9. Abstract
Osborn, K. D.; Bartlett, R. K.; Mandal, A.; Zaidi, A.; Urbauer, R. J.; Urbauer, J. L.; Galeva, N.; Williams, T. D.; Johnson, C. K. Single-molecule dynamics reveal an altered conformation for the autoinhibitory domain of plasma membrane Ca(2+)-ATPase bound to oxidatively modified calmodulin. Biochemistry 2004, 43, 12937-44. Abstract
Gregory, B. D.; Nickels, B. E.; Garrity, S. J.; Severinova, E.; Minakhin, L.; Urbauer, R. J.; Urbauer, J. L.; Heyduk, T.; Severinov, K.; Hochschild, A. A regulator that inhibits transcription by targeting an intersubunit interaction of the RNA polymerase holoenzyme. Proc Natl Acad Sci U S A 2004, 101, 4554-9. Abstract
Allen, M. W.; Urbauer, R. J. B.; Johnson, C. K. Single-molecule assays of calmodulin target binding detected with a calmodulin energy-transfer construct. Anal Chem 2004, 76, 3630-3637. Abstract
Allen, M. W.; Urbauer, R. J.; Zaidi, A.; Williams, T. D.; Urbauer, J. L.; Johnson, C. K. Fluorescence labeling, purification, and immobilization of a double cysteine mutant calmodulin fusion protein for single-molecule experiments. Anal Biochem 2004, 325, 273-84. Abstract
Wang, L.; Bieber Urbauer, R. J.; Urbauer, J. L.; Benson, D. R. House fly cytochrome b5 exhibits kinetically trapped hemin and selectivity in hemin binding. Biochem Biophys Res Commun 2003, 305, 840-5. Abstract
Smallwood, H. S.; Galeva, N. A.; Bartlett, R. K.; Urbauer, R. J.; Williams, T. D.; Urbauer, J. L.; Squier, T. C. Selective nitration of Tyr99 in calmodulin as a marker of cellular conditions of oxidative stress. Chem Res Toxicol 2003, 16, 95-102. Abstract
Simeonov, M. F.; Bieber Urbauer, R. J.; Gilmore, J. M.; Adelman, K.; Brody, E. N.; Niedziela-Majka, A.; Minakhin, L.; Heyduk, T.; Urbauer, J. L. Characterization of the interactions between the bacteriophage T4 AsiA protein and RNA polymerase. Biochemistry 2003, 42, 7717-26. Abstract
Osborn, K. D.; Singh, M. K.; Urbauer, R. J. B.; Johnson, C. K. Maximum-likelihood approach to single-molecule polarization modulation analysis. Chemphyschem 2003, 4, 1005-1011.